Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX340560: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-149738' containing sample 'Escherichia coli UMEA 3201-1'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5M spots, 1G bases, 574.4Mb downloads

UUID: 58bc40ba-fe2b-4d94-88a6-966e6c426a81

Design: jumping library

Submitted by: Broad Institute (BI)

Study: E coli UTI Bacteremia

PRJNA186316 • SRP019677 • All experiments • All runs

Sample: Pathogen bacterial, clinical or host-associated sample from Escherichia coli UMEA 3201-1

SAMN01885926 • SRS402318 • All experiments • All runs

Organism: Escherichia coli UMEA 3201-1

Library:

Name: Solexa-149738

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 301206.0

library_type: IlluminaStufferlessJump

lsid: broadinstitute.org:bsp.prod.sample:425MW

material_type: DNA:DNA Somatic

product_order: PDO-291

product_part_number: P-MCV-0001

project: G30228

research_project: RP-192

root_sample_id: SM-2TD54

sample_id: SM-425MW

work_request: 35883

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-05-08 00:28:38.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 2 runs, 5M spots, 1G bases, 574.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR958631	2,514,046	507.8M	287Mb	2013-08-28
SRR958632	2,516,627	508.4M	287.4Mb	2013-08-28

ID:: 478344

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